Trans-eQTLs across different cancer types
In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.
|
Cancer type
|
SNP ID
|
SNP position (hg19)
|
Alleles (A/a)
|
Gene symbol
|
Gene position (hg19)
|
p-valule
|
|||
|---|---|---|---|---|---|---|---|---|---|
| THCA | rs7833966 | chr8:11206220 | C/G | SGK223 | chr8:8175258-8244008:- | -0.37 | -6.97 | 1.08E-11 | Box Plot |
| THCA | rs7834139 | chr8:11206363 | C/G | SGK223 | chr8:8175258-8244008:- | -0.36 | -6.8 | 3.14E-11 | Box Plot |
| THCA | rs7834248 | chr8:10770311 | G/T | SGK223 | chr8:8175258-8244008:- | 0.34 | 7 | 8.93E-12 | Box Plot |
| THCA | rs7834572 | chr8:11236685 | C/T | SGK223 | chr8:8175258-8244008:- | 0.47 | 9.24 | 7.87E-19 | Box Plot |
| THCA | rs7835196 | chr8:3245378 | C/T | CSMD1 | chr8:2792875-4852494:- | -0.32 | -6.18 | 1.36E-9 | Box Plot |
| THCA | rs7835318 | chr8:10953874 | G/A | SGK223 | chr8:8175258-8244008:- | 0.48 | 9.12 | 2.16E-18 | Box Plot |
| THCA | rs7836456 | chr8:11829175 | T/G | SGK223 | chr8:8175258-8244008:- | -0.4 | -7.52 | 2.76E-13 | Box Plot |
| THCA | rs7836608 | chr8:11829308 | T/C | SGK223 | chr8:8175258-8244008:- | -0.38 | -7.11 | 4.17E-12 | Box Plot |
| THCA | rs7836687 | chr8:10853070 | C/T | SGK223 | chr8:8175258-8244008:- | 0.4 | 7.31 | 1.16E-12 | Box Plot |
| THCA | rs7836720 | chr8:10853837 | C/G | SGK223 | chr8:8175258-8244008:- | 0.39 | 7.09 | 4.75E-12 | Box Plot |
| THCA | rs7836953 | chr8:11835712 | A/G | SGK223 | chr8:8175258-8244008:- | -0.37 | -7.16 | 3.01E-12 | Box Plot |
| THCA | rs7837036 | chr8:11175489 | A/G | SGK223 | chr8:8175258-8244008:- | -0.39 | -7.54 | 2.44E-13 | Box Plot |
| THCA | rs7837038 | chr8:10783074 | G/A | SGK223 | chr8:8175258-8244008:- | 0.32 | 6.33 | 5.56E-10 | Box Plot |
| THCA | rs7837828 | chr8:10853868 | A/G | SGK223 | chr8:8175258-8244008:- | -0.38 | -7.12 | 3.86E-12 | Box Plot |
| THCA | rs7837979 | chr8:10198534 | C/T | SGK223 | chr8:8175258-8244008:- | -0.3 | -6.02 | 3.44E-9 | Box Plot |